You are looking at the quantitative interactomic profile of the site PDZ_4 of LNX1


UniProt ID: Q8TBB1
Molecule ID: LNX1 (Link to all interactions of this molecule.)
Alternative name(s): LNX PDZRN2 UNQ574/PRO1136


The selection have 1 unique variants
non-modified profile

The selection have 1 unique fragments
631-726 fragment

The selection have 1 unique sites
PDZ_4 sites

The current selection is unique





You see an affinity binding profile calculated for site-specific interactions, where affinities measured using the same site of the same molecules are combined. To access affinities of the entire molecule or other functional fragments or sites, go back to the molecular interaction page.


Partners Experiment
IDUniProtSiteModificationCore SequencepKd
Site-specific affinities
are averaged on this page.
St.dev
Standard deviation is calculated
using affinities obtained from
independent experiment series.


* indicates that affinity was
not detectable in all
experiments
nQI
Quality indicator
n > 1 and St.dev < 0.5 pKd
n > 1 and St.dev > 0.5 pKd
or only detectable in a subset
of experiment series
n > 1, but originating
from a single experiment series
n = 1
CBPQ92793PBMDTLEKFVEGL4.651
PTENP60484PBMEDQHTQITKV4.591
HPV18-E6P06463PBMRLQRRRETQV4.031
HPV35-E6P27228PBMSKPTRRETEV3.491
HPV16-E6P03126PBMSSRTRRETQLnot detectable4
WNV-NS5Q9Q6P4PBMDTTLVEDTVLnot detectable3
HBV-HbcP03146PBMRRSQSRESQCnot detectable2
MERS-EK9N5R3PBMKPPLPPDEWVnot detectable2
RPS6KA1Q15418PBM(SEP)732RVRKLPSTTLnot detectable2
SARS-Cov2-3aP0DTC3PBMEPTTTTSVPLnot detectable2
SARS-Cov2-NP0DTC9PBMSMSSADSTQAnot detectable2
HTLV1-TAX1P03409PBMSEKHFRETEVnot detectable1
RPS6KA1Q15418PBMRVRKLPSTTLnot detectable1
SARS-CoV2-EP0DTC4PBMNSSRVPDLLVnot detectable1
SARS-Cov-EP59637PBMSSEGVPDLLVnot detectable1





The database contains 4 motifs with quantifiable (site-specific) affinities to the selected protein.
Out of these, 3 affinities are above the threshold (3.5 pKd).
Interactions above the threshold are used for LOGO calculation.

Frequency LOGO

Affinity-weighted frequency LOGO

Modify the parameters of LOGO calculation:


Threshold: 3.5 pKd    

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