Details of experiments between Q9Y4G8 and Q02410
Note that the results of all experiments are listed, regardless of the modification states of the fragments.
Experiment series 1
Protein A protein: RAPGEF2
Protein A fragment: 1490-1499
Protein A site: PBM
Protein A sequence: EDEDEQVSAV
Protein A construct: Biotin-Ahx-EDEDEQVSAV
Protein B protein: APBA1
Protein B fragment: 743-822
Protein B site: PDZ_2
Protein B construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.06
Normalized holdup BI: 0.07
Immobilized partner concentration in holdup experiment (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
PUBMED ID of publication: 36115835
Number of measurements: 1
Measured pKd: 3.65
Experiment series 2
Protein A protein: RAPGEF2
Protein A fragment: 1490-1499
Protein A site: PBM
Protein A sequence: EDEDEQVSAV
Protein A construct: Biotin-Ahx-EDEDEQVSAV
Protein B protein: APBA1
Protein B fragment: 655-741
Protein B site: PDZ_1
Protein B construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0.03
Normalized holdup BI: -0.03
Immobilized partner concentration in holdup experiment (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
PUBMED ID of publication: 36115835
Number of measurements: 1
The affinity was below the detection threshold of the assay.