Details of experiments between the fragments Q9UF33~1027-1036 and Q12923~1085-1188
Note that the results of all experiments are listed, regardless of the modification states of the fragments.
Experiment series 1
Protein A protein: EPHA6
Protein A fragment: 1027-1036
Protein A site: PBM
Protein A sequence: MHIQEKGFHV
Protein A construct: biotin-ado-ado-MHIQEKGFHV
Protein B protein: PTPN13
Protein B fragment: 1085-1188
Protein B site: PDZ_1
Protein B construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.03
Normalized holdup BI: 0.03
Immobilized partner concentration in holdup experiment (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Experimental details: Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality causing a systematic error in reported affinities.
PUBMED ID of publication: 36115835
Number of measurements: 1
The affinity was below the detection threshold of the assay.