Details of experiments between Q9P202 and Q15018
Note that the results of all experiments are listed, regardless of the modification states of the fragments.
Experiment series 1
Protein A protein: DFNB31
Protein A fragment: 136-226
Protein A site: PDZ_1
Protein A construct: his6-MBP-TEVsite-PDZ
Protein B protein: ABRAXAS2
Protein B fragment: 406-415
Protein B site: PBM
Protein B sequence: DPRNTQTSQI
Protein B construct: biotin-ttds-DPRNTQTSQI
Average holdup BI: 0.17
Normalized holdup BI: 0.17
Immobilized partner concentration in holdup experiment (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
PUBMED ID of publication: 36115835
Number of measurements: 1
Measured pKd: 4.06
Experiment series 2
Protein A protein: DFNB31
Protein A fragment: 813-904
Protein A site: PDZ_3
Protein A construct: his6-MBP-TEVsite-PDZ
Protein B protein: ABRAXAS2
Protein B fragment: 406-415
Protein B site: PBM
Protein B sequence: DPRNTQTSQI
Protein B construct: biotin-ttds-DPRNTQTSQI
Average holdup BI: 0.08
Normalized holdup BI: 0.08
Immobilized partner concentration in holdup experiment (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
PUBMED ID of publication: 36115835
Number of measurements: 1
Measured pKd: 3.67
Experiment series 3
Protein A protein: DFNB31
Protein A fragment: 263-379
Protein A site: PDZ_2
Protein A construct: his6-MBP-TEVsite-PDZ
Protein B protein: ABRAXAS2
Protein B fragment: 406-415
Protein B site: PBM
Protein B sequence: DPRNTQTSQI
Protein B construct: biotin-ttds-DPRNTQTSQI
Average holdup BI: 0.07
Normalized holdup BI: 0.07
Immobilized partner concentration in holdup experiment (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
PUBMED ID of publication: 36115835
Number of measurements: 1
Measured pKd: 3.62