Details of experiments between Q96L92 and Q6UXZ0
Note that the results of all experiments are listed, regardless of the modification states of the fragments.
Experiment series 1
Protein A protein: SNX27
Protein A fragment: 40-141
Protein A site: PDZ
Protein A construct: his6-MBP-TEVsite-PDZ
Protein B protein: TMIGD1
Protein B fragment: 253-262
Protein B site: PBM
Protein B sequence: DKDPHSETAL
Protein B construct: biotin-ttds-DKDPHSETAL
Measured dissociation constant (10-6M): 4.37
Standard deviation of dissociation constant (10-6M): 0.1
Experiment method: competitive FP
Details of affinity fitting: Competitive binding equation in ProFit
PUBMED ID of publication: 36115835
Number of measurements: 3
Measured pKd: 5.36
Experiment series 2
Protein A protein: SNX27
Protein A fragment: 40-141
Protein A site: PDZ
Protein A construct: his6-MBP-TEVsite-PDZ
Protein B protein: TMIGD1
Protein B fragment: 253-262
Protein B site: PBM
Protein B sequence: DKDPHSETAL
Protein B construct: biotin-ttds-DKDPHSETAL
Average holdup BI: 0.82
Holdup BI standard deviation: 0.05
Normalized holdup BI: 0.82
Normalized holdup BI standard deviation: 0.05
Immobilized partner concentration in holdup experiment (10-6M): 18.1
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
PUBMED ID of publication: 36115835
Number of measurements: 3
Measured pKd: 5.49