Details of experiments between the fragments Q6P0Q8~1102-1193 and Q92793~2433-2442
Note that the results of all experiments are listed, regardless of the modification states of the fragments.
Experiment series 1
Protein A protein: MAST2
Protein A fragment: 1102-1193
Protein A site: PDZ
Protein A construct: his6-MBP-TEVsite-PDZ
Protein B protein: CBP
Protein B fragment: 2433-2442
Protein B site: PBM
Protein B sequence: DTLEKFVEGL
Protein B construct: Biotin-ttds-TGDTLEKFVEGL
Average holdup BI: 0.02
Immobilized partner concentration in holdup experiment (10-6M): 18
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
PUBMED ID of publication: 36115835
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 2
Protein A protein: MAST2
Protein A fragment: 1102-1193
Protein A site: PDZ
Protein A construct: his6-MBP-TEVsite-PDZ
Protein B protein: CBP
Protein B fragment: 2433-2442
Protein B site: PBM
Protein B sequence: DTLEKFVEGL
Protein B construct: Biotin-ttds-TGDTLEKFVEGL
Measured dissociation constant (10-6M): 0
Experiment method: competitive FP
Details of affinity fitting: Competitive binding equation in ProFit
PUBMED ID of publication: 36115835
Number of measurements: 3
The affinity was below the detection threshold of the assay.
Experiment series 3
Protein A protein: MAST2
Protein A fragment: 1102-1193
Protein A site: PDZ
Protein A construct: his6-MBP-TEVsite-PDZ
Protein B protein: CBP
Protein B fragment: 2433-2442
Protein B site: PBM
Protein B sequence: DTLEKFVEGL
Protein B construct: Biotin-ttds-TGDTLEKFVEGL
Average holdup BI: 0
Holdup BI standard deviation: 0.02
Normalized holdup BI: 0
Normalized holdup BI standard deviation: 0.02
Immobilized partner concentration in holdup experiment (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
PUBMED ID of publication: 36115835
Number of measurements: 2
The affinity was below the detection threshold of the assay.