Details of experiments between the fragments Q6P0Q8~1102-1193 and P22459~644-653
Note that the results of all experiments are listed, regardless of the modification states of the fragments.
Experiment series 1
Protein A protein: MAST2
Protein A fragment: 1102-1193
Protein A site: PDZ
Protein A construct: his6-MBP-TEVsite-PDZ
Protein B protein: KCNA4
Protein B fragment: 644-653
Protein B site: PBM
Protein B sequence: SNAKAVETDV
Protein B construct: biotin-ttds-SNAKAVETDV
Average holdup BI: 0.7
Normalized holdup BI: 0.7
Immobilized partner concentration in holdup experiment (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
PUBMED ID of publication: 36115835
Number of measurements: 1
Measured pKd: 5.18
Experiment series 2
Protein A protein: MAST2
Protein A fragment: 1102-1193
Protein A site: PDZ
Protein A construct: his6-MBP-TEVsite-PDZ
Protein B protein: KCNA4
Protein B fragment: 644-653
Protein B site: PBM
Protein B sequence: SNAKAVETDV
Protein B construct: Biotin-ado-ado-SNAKAVETDV
Average holdup BI: 0.74
Normalized holdup BI: 0.74
Immobilized partner concentration in holdup experiment (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Experimental details: Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality. Not reported internal standards of holdup layout #6
PUBMED ID of publication: 36115835
Number of measurements: 1
Measured pKd: 5.28