Details of experiments between Q5VV41 and Q9C0E4
Note that the results of all experiments are listed, regardless of the modification states of the fragments.
Experiment series 1
Protein A protein: ARHGEF16
Protein A fragment: 700-709
Protein A site: PBM
Protein A sequence: MERLRVETDV
Protein A construct: biotin-ttds-MERLRVETDV
Protein B protein: GRIP2
Protein B fragment: 41-133
Protein B site: PDZ_1
Protein B construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.01
Immobilized partner concentration in holdup experiment (10-6M): 10
Experiment method: SAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normal layout
PUBMED ID of publication: 36115835
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 2
Protein A protein: ARHGEF16
Protein A fragment: 700-709
Protein A site: PBM
Protein A sequence: MERLRVETDV
Protein A construct: biotin-ttds-MERLRVETDV
Protein B protein: GRIP2
Protein B fragment: 137-245
Protein B site: PDZ_2
Protein B construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.03
Immobilized partner concentration in holdup experiment (10-6M): 10
Experiment method: SAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normal layout
PUBMED ID of publication: 36115835
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 3
Protein A protein: ARHGEF16
Protein A fragment: 700-709
Protein A site: PBM
Protein A sequence: MERLRVETDV
Protein A construct: biotin-ttds-MERLRVETDV
Protein B protein: GRIP2
Protein B fragment: 238-339
Protein B site: PDZ_3
Protein B construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0.04
Immobilized partner concentration in holdup experiment (10-6M): 10
Experiment method: SAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normal layout
PUBMED ID of publication: 36115835
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 4
Protein A protein: ARHGEF16
Protein A fragment: 700-709
Protein A site: PBM
Protein A sequence: MERLRVETDV
Protein A construct: biotin-ttds-MERLRVETDV
Protein B protein: GRIP2
Protein B fragment: 446-548
Protein B site: PDZ_4
Protein B construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.01
Immobilized partner concentration in holdup experiment (10-6M): 10
Experiment method: SAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normal layout
PUBMED ID of publication: 36115835
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 5
Protein A protein: ARHGEF16
Protein A fragment: 700-709
Protein A site: PBM
Protein A sequence: MERLRVETDV
Protein A construct: biotin-ttds-MERLRVETDV
Protein B protein: GRIP2
Protein B fragment: 544-642
Protein B site: PDZ_5
Protein B construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0
Immobilized partner concentration in holdup experiment (10-6M): 10
Experiment method: SAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normal layout
PUBMED ID of publication: 36115835
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 6
Protein A protein: ARHGEF16
Protein A fragment: 700-709
Protein A site: PBM
Protein A sequence: MERLRVETDV
Protein A construct: biotin-ttds-MERLRVETDV
Protein B protein: GRIP2
Protein B fragment: 649-740
Protein B site: PDZ_6
Protein B construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.02
Immobilized partner concentration in holdup experiment (10-6M): 10
Experiment method: SAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normal layout
PUBMED ID of publication: 36115835
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 7
Protein A protein: ARHGEF16
Protein A fragment: 700-709
Protein A site: PBM
Protein A sequence: MERLRVETDV
Protein A construct: biotin-ttds-MERLRVETDV
Protein B protein: GRIP2
Protein B fragment: 934-1023
Protein B site: PDZ_7
Protein B construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0.01
Immobilized partner concentration in holdup experiment (10-6M): 10
Experiment method: SAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normal layout
PUBMED ID of publication: 36115835
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 8
Protein A protein: ARHGEF16
Protein A fragment: 700-709
Protein A site: PBM
Protein A sequence: MERLRVETDV
Protein A construct: biotin-ttds-MERLRVETDV
Protein B protein: GRIP2
Protein B fragment: 934-1023
Protein B site: PDZ_7
Protein B construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.07
Normalized holdup BI: 0.07
Immobilized partner concentration in holdup experiment (10-6M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
PUBMED ID of publication: 36115835
Number of measurements: 1
Measured pKd: 3.64
Experiment series 9
Protein A protein: ARHGEF16
Protein A fragment: 700-709
Protein A site: PBM
Protein A sequence: MERLRVETDV
Protein A construct: biotin-ttds-MERLRVETDV
Protein B protein: GRIP2
Protein B fragment: 238-339
Protein B site: PDZ_3
Protein B construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0.05
Normalized holdup BI: -0.05
Immobilized partner concentration in holdup experiment (10-6M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
PUBMED ID of publication: 36115835
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 10
Protein A protein: ARHGEF16
Protein A fragment: 700-709
Protein A site: PBM
Protein A sequence: MERLRVETDV
Protein A construct: biotin-ttds-MERLRVETDV
Protein B protein: GRIP2
Protein B fragment: 446-548
Protein B site: PDZ_4
Protein B construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0.05
Normalized holdup BI: -0.05
Immobilized partner concentration in holdup experiment (10-6M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
PUBMED ID of publication: 36115835
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 11
Protein A protein: ARHGEF16
Protein A fragment: 700-709
Protein A site: PBM
Protein A sequence: MERLRVETDV
Protein A construct: biotin-ttds-MERLRVETDV
Protein B protein: GRIP2
Protein B fragment: 544-642
Protein B site: PDZ_5
Protein B construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0.06
Normalized holdup BI: -0.06
Immobilized partner concentration in holdup experiment (10-6M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
PUBMED ID of publication: 36115835
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 12
Protein A protein: ARHGEF16
Protein A fragment: 700-709
Protein A site: PBM
Protein A sequence: MERLRVETDV
Protein A construct: biotin-ttds-MERLRVETDV
Protein B protein: GRIP2
Protein B fragment: 649-740
Protein B site: PDZ_6
Protein B construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0
Normalized holdup BI: -0
Immobilized partner concentration in holdup experiment (10-6M): 17
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
PUBMED ID of publication: 36115835
Number of measurements: 1
The affinity was below the detection threshold of the assay.