Details of experiments between the fragments Q5T2W1~2-107 and Q9Y2T3~445-454
Note that the results of all experiments are listed, regardless of the modification states of the fragments.
Experiment series 1
Protein A protein: NHERF3
Protein A fragment: 2-107
Protein A site: PDZ_1
Protein A construct: his6-MBP-TEVsite-PDZ
Protein B protein: GDA
Protein B fragment: 445-454
Protein B site: PBM
Protein B sequence: KQVVPFSSSV
Protein B construct: biotin-ttds-KQVVPFSSSV
Average holdup BI: 0.24
Holdup BI standard deviation: 0.02
Normalized holdup BI: 0.26
Normalized holdup BI standard deviation: 0.02
Immobilized partner concentration in holdup experiment (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
PUBMED ID of publication: 36115835
Number of measurements: 2
Measured pKd: 4.31