Details of experiments between the fragments Q58EX2~2163-2172 and Q8TBB1~261-371
Note that the results of all experiments are listed, regardless of the modification states of the fragments.
Experiment series 1
Protein A protein: SDK2
Protein A fragment: 2163-2172
Protein A site: PBM
Protein A sequence: APIAGFSSFV
Protein A construct: biotin-ado-ado-APIAGFSSFV
Protein B protein: LNX1
Protein B fragment: 261-371
Protein B site: PDZ_1
Protein B construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.45
Normalized holdup BI: 0.69
Immobilized partner concentration in holdup experiment (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Experimental details: Crude peptide synthesis product. The peptide concentration in the affinity conversion step may differ from reality causing a systematic error in reported affinities.
PUBMED ID of publication: 36115835
Number of measurements: 1
Measured pKd: 5.16