Details of experiments between the fragments Q15311~646-655 and Q13424~84-171
Note that the results of all experiments are listed, regardless of the modification states of the fragments.
Experiment series 1
Protein A protein: RALBP1
Protein A fragment: 646-655
Protein A site: PBM
Protein A sequence: PSRDRKETSI
Protein A construct: biotin-ttds-PSRDRKETSI
Protein B protein: SNTA1
Protein B fragment: 84-171
Protein B site: PDZ
Protein B construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.17
Immobilized partner concentration in holdup experiment (10-6M): 20
Experiment method: SAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normal layout
PUBMED ID of publication: 36115835
Number of measurements: 1
Measured pKd: 4.04
Experiment series 2
Protein A protein: RALBP1
Protein A fragment: 646-655
Protein A site: PBM
Protein A sequence: PSRDRKETSI
Protein A construct: biotin-ttds-PSRDRKETSI
Protein B protein: SNTA1
Protein B fragment: 84-171
Protein B site: PDZ
Protein B construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.21
Normalized holdup BI: 0.24
Immobilized partner concentration in holdup experiment (10-6M): 28
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
PUBMED ID of publication: 36115835
Number of measurements: 1
Measured pKd: 4.06
Experiment series 3
Protein A protein: RALBP1
Protein A fragment: 646-655
Protein A site: PBM
Protein A sequence: PSRDRKETSI
Protein A construct: biotin-ttds-PSRDRKETSI
Protein B protein: SNTA1
Protein B fragment: 84-171
Protein B site: PDZ
Protein B construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.15
Normalized holdup BI: 0.16
Immobilized partner concentration in holdup experiment (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Experimental details: not reported internal standards of holdup layout #6
PUBMED ID of publication: 36115835
Number of measurements: 1
Measured pKd: 4.05