Details of experiments between the fragments P61981~1-247 and Q12802~1637-1646
Note that the results of all experiments are listed, regardless of the modification states of the fragments.
Experiment series 1
Protein A protein: YWHAG
Protein A fragment: 1-247
Protein A site: 14-3-3
Protein A construct: avi-his6-MBP-TEVsite-14-3-3gamma
Protein B protein: AKAP13
Protein B fragment: 1637-1646
Protein B site: 14-3-3_pSer1642
Protein B modification: (SEP)1642
Protein B sequence: EERVDSLVSL
Protein B construct: EERVD(pSer)LVSL (crude synthetic peptide)
Average holdup BI: -0.31
Holdup BI standard deviation: 0.3
Immobilized partner concentration in holdup experiment (10-6M): 134
P value (usually -log10(P Two-sided unpaired T-test), but double check the experimental details): 1.12
Experiment method: HU Multiplex
Details of affinity fitting: hyperbolic binding equation
Date of measurement: 2022.02.17.
Experimental details: -log10(P Two-sided unpaired T-test (4 vs 4))
Number of measurements: 4
The affinity was below the detection threshold of the assay.
Experiment series 2
Protein A protein: YWHAG
Protein A fragment: 1-247
Protein A site: 14-3-3
Protein A modification: 100_uM_FCA
Protein A construct: avi-his6-MBP-TEVsite-14-3-3gamma
Protein B protein: AKAP13
Protein B fragment: 1637-1646
Protein B site: 14-3-3_pSer1642
Protein B modification: (SEP)1642
Protein B sequence: EERVDSLVSL
Protein B construct: EERVD(pSer)LVSL (crude synthetic peptide)
Average holdup BI: 0.07
Holdup BI standard deviation: 0.13
Immobilized partner concentration in holdup experiment (10-6M): 115
P value (usually -log10(P Two-sided unpaired T-test), but double check the experimental details): 0.51
Experiment method: HU Multiplex
Details of affinity fitting: hyperbolic binding equation
Date of measurement: 2022.02.17.
Experimental details: -log10(P Two-sided unpaired T-test (4 vs 4))
Number of measurements: 4
The affinity was below the detection threshold of the assay.
Experiment series 3
Protein A protein: YWHAG
Protein A fragment: 1-247
Protein A site: 14-3-3
Protein A construct: avi-his6-MBP-TEVsite-14-3-3gamma
Protein B protein: AKAP13
Protein B fragment: 1637-1646
Protein B site: 14-3-3_pSer1642
Protein B modification: (SEP)1642
Protein B sequence: EERVDSLVSL
Protein B construct: EERVD(pSer)LVSL (crude synthetic peptide)
Average holdup BI: -0.08
Holdup BI standard deviation: 0.16
Immobilized partner concentration in holdup experiment (10-6M): 129
P value (usually -log10(P Two-sided unpaired T-test), but double check the experimental details): 0.47
Experiment method: HU Multiplex
Details of affinity fitting: hyperbolic binding equation
Date of measurement: 2021.10.13.
Experimental details: -log10(P Two-sided unpaired T-test (4 vs 5))
Number of measurements: 5
The affinity was below the detection threshold of the assay.