Details of experiments between the fragments P23634~1232-1241 and Q12923~1085-1188
Note that the results of all experiments are listed, regardless of the modification states of the fragments.
Experiment series 1
Protein A protein: ATP2B4
Protein A fragment: 1232-1241
Protein A site: PBM
Protein A sequence: SSLQSLETSV
Protein A construct: biotin-ttds-SSLQSLETSV
Protein B protein: PTPN13
Protein B fragment: 1085-1188
Protein B site: PDZ_1
Protein B construct: his6-MBP-TEVsite-PDZ
Average holdup BI: -0.15
Immobilized partner concentration in holdup experiment (10-6M): 7
Experiment method: SAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normal layout
PUBMED ID of publication: 36115835
Number of measurements: 1
The affinity was below the detection threshold of the assay.
Experiment series 2
Protein A protein: ATP2B4
Protein A fragment: 1232-1241
Protein A site: PBM
Protein A sequence: SSLQSLETSV
Protein A construct: biotin-ttds-SSLQSLETSV
Protein B protein: PTPN13
Protein B fragment: 1085-1188
Protein B site: PDZ_1
Protein B construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0.05
Normalized holdup BI: 0.05
Immobilized partner concentration in holdup experiment (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
PUBMED ID of publication: 36115835
Number of measurements: 1
Measured pKd: 3.5
Experiment series 3
Protein A protein: ATP2B4
Protein A fragment: 1232-1241
Protein A site: PBM
Protein A sequence: SSLQSLETSV
Protein A construct: biotin-ttds-SSLQSLETSV
Protein B protein: PTPN13
Protein B fragment: 1085-1188
Protein B site: PDZ_1
Protein B construct: his6-MBP-TEVsite-PDZ
Average holdup BI: 0
Normalized holdup BI: 0
Immobilized partner concentration in holdup experiment (10-6M): 18
Experiment method: DAPF_holdup
Details of affinity fitting: fluorescein + mCherry internal standards + normalization based on CALIP_holdup data + reverse layout
Experimental details: not reported internal standards of holdup layout #6
PUBMED ID of publication: 36115835
Number of measurements: 1
The affinity was below the detection threshold of the assay.