Details of experiments between O75970 and P0DTC3
Note that the results of all experiments are listed, regardless of the modification states of the fragments.
Experiment series 1
Protein A protein: MPDZ
Protein A fragment: 120-230
Protein A site: PDZ_1
Protein A construct: his6-MBP-TEVsite-PDZ
Protein B protein: SARS-Cov2-3a
Protein B fragment: 266-275
Protein B site: PBM
Protein B sequence: EPTTTTSVPL
Protein B construct: Biotin-(PEG)3-YDEPTTTTSVPL
Average holdup BI: -0.04
Holdup BI standard deviation: 0.05
Immobilized partner concentration in holdup experiment (10-6M): 20
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
PUBMED ID of publication: 36115835
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 2
Protein A protein: MPDZ
Protein A fragment: 1624-1716
Protein A site: PDZ_10
Protein A construct: his6-MBP-TEVsite-PDZ
Protein B protein: SARS-Cov2-3a
Protein B fragment: 266-275
Protein B site: PBM
Protein B sequence: EPTTTTSVPL
Protein B construct: Biotin-(PEG)3-YDEPTTTTSVPL
Average holdup BI: -0.08
Holdup BI standard deviation: 0.03
Immobilized partner concentration in holdup experiment (10-6M): 20
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
PUBMED ID of publication: 36115835
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 3
Protein A protein: MPDZ
Protein A fragment: 1722-1810
Protein A site: PDZ_11
Protein A construct: his6-MBP-TEVsite-PDZ
Protein B protein: SARS-Cov2-3a
Protein B fragment: 266-275
Protein B site: PBM
Protein B sequence: EPTTTTSVPL
Protein B construct: Biotin-(PEG)3-YDEPTTTTSVPL
Average holdup BI: -0.04
Holdup BI standard deviation: 0.03
Immobilized partner concentration in holdup experiment (10-6M): 20
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
PUBMED ID of publication: 36115835
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 4
Protein A protein: MPDZ
Protein A fragment: 1858-1949
Protein A site: PDZ_12
Protein A construct: his6-MBP-TEVsite-PDZ
Protein B protein: SARS-Cov2-3a
Protein B fragment: 266-275
Protein B site: PBM
Protein B sequence: EPTTTTSVPL
Protein B construct: Biotin-(PEG)3-YDEPTTTTSVPL
Average holdup BI: -0.06
Holdup BI standard deviation: 0.02
Immobilized partner concentration in holdup experiment (10-6M): 20
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
PUBMED ID of publication: 36115835
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 5
Protein A protein: MPDZ
Protein A fragment: 1982-2070
Protein A site: PDZ_13
Protein A construct: his6-MBP-TEVsite-PDZ
Protein B protein: SARS-Cov2-3a
Protein B fragment: 266-275
Protein B site: PBM
Protein B sequence: EPTTTTSVPL
Protein B construct: Biotin-(PEG)3-YDEPTTTTSVPL
Average holdup BI: -0.09
Holdup BI standard deviation: 0.02
Immobilized partner concentration in holdup experiment (10-6M): 20
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
PUBMED ID of publication: 36115835
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 6
Protein A protein: MPDZ
Protein A fragment: 246-342
Protein A site: PDZ_2
Protein A construct: his6-MBP-TEVsite-PDZ
Protein B protein: SARS-Cov2-3a
Protein B fragment: 266-275
Protein B site: PBM
Protein B sequence: EPTTTTSVPL
Protein B construct: Biotin-(PEG)3-YDEPTTTTSVPL
Average holdup BI: -0.04
Holdup BI standard deviation: 0.06
Immobilized partner concentration in holdup experiment (10-6M): 20
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
PUBMED ID of publication: 36115835
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 7
Protein A protein: MPDZ
Protein A fragment: 371-467
Protein A site: PDZ_3
Protein A construct: his6-MBP-TEVsite-PDZ
Protein B protein: SARS-Cov2-3a
Protein B fragment: 266-275
Protein B site: PBM
Protein B sequence: EPTTTTSVPL
Protein B construct: Biotin-(PEG)3-YDEPTTTTSVPL
Average holdup BI: -0.05
Holdup BI standard deviation: 0.16
Immobilized partner concentration in holdup experiment (10-6M): 20
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
PUBMED ID of publication: 36115835
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 8
Protein A protein: MPDZ
Protein A fragment: 548-634
Protein A site: PDZ_4
Protein A construct: his6-MBP-TEVsite-PDZ
Protein B protein: SARS-Cov2-3a
Protein B fragment: 266-275
Protein B site: PBM
Protein B sequence: EPTTTTSVPL
Protein B construct: Biotin-(PEG)3-YDEPTTTTSVPL
Average holdup BI: -0.1
Holdup BI standard deviation: 0.02
Immobilized partner concentration in holdup experiment (10-6M): 20
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
PUBMED ID of publication: 36115835
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 9
Protein A protein: MPDZ
Protein A fragment: 688-793
Protein A site: PDZ_5
Protein A construct: his6-MBP-TEVsite-PDZ
Protein B protein: SARS-Cov2-3a
Protein B fragment: 266-275
Protein B site: PBM
Protein B sequence: EPTTTTSVPL
Protein B construct: Biotin-(PEG)3-YDEPTTTTSVPL
Average holdup BI: -0.02
Holdup BI standard deviation: 0.01
Immobilized partner concentration in holdup experiment (10-6M): 20
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
PUBMED ID of publication: 36115835
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 10
Protein A protein: MPDZ
Protein A fragment: 998-1105
Protein A site: PDZ_6
Protein A construct: his6-MBP-TEVsite-PDZ
Protein B protein: SARS-Cov2-3a
Protein B fragment: 266-275
Protein B site: PBM
Protein B sequence: EPTTTTSVPL
Protein B construct: Biotin-(PEG)3-YDEPTTTTSVPL
Average holdup BI: -0.02
Holdup BI standard deviation: 0.04
Immobilized partner concentration in holdup experiment (10-6M): 20
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
PUBMED ID of publication: 36115835
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 11
Protein A protein: MPDZ
Protein A fragment: 1141-1246
Protein A site: PDZ_7
Protein A construct: his6-MBP-TEVsite-PDZ
Protein B protein: SARS-Cov2-3a
Protein B fragment: 266-275
Protein B site: PBM
Protein B sequence: EPTTTTSVPL
Protein B construct: Biotin-(PEG)3-YDEPTTTTSVPL
Average holdup BI: -0.05
Holdup BI standard deviation: 0.01
Immobilized partner concentration in holdup experiment (10-6M): 20
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
PUBMED ID of publication: 36115835
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 12
Protein A protein: MPDZ
Protein A fragment: 1325-1441
Protein A site: PDZ_8
Protein A construct: his6-MBP-TEVsite-PDZ
Protein B protein: SARS-Cov2-3a
Protein B fragment: 266-275
Protein B site: PBM
Protein B sequence: EPTTTTSVPL
Protein B construct: Biotin-(PEG)3-YDEPTTTTSVPL
Average holdup BI: -0.06
Holdup BI standard deviation: 0.04
Immobilized partner concentration in holdup experiment (10-6M): 20
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
PUBMED ID of publication: 36115835
Number of measurements: 2
The affinity was below the detection threshold of the assay.
Experiment series 13
Protein A protein: MPDZ
Protein A fragment: 1464-1572
Protein A site: PDZ_9
Protein A construct: his6-MBP-TEVsite-PDZ
Protein B protein: SARS-Cov2-3a
Protein B fragment: 266-275
Protein B site: PBM
Protein B sequence: EPTTTTSVPL
Protein B construct: Biotin-(PEG)3-YDEPTTTTSVPL
Average holdup BI: 0.05
Holdup BI standard deviation: 0.03
Immobilized partner concentration in holdup experiment (10-6M): 20
Experiment method: CALIP_holdup
Details of affinity fitting: BSA and lysozyme internal standards + bacterial cell lysate + normal layout
PUBMED ID of publication: 36115835
Number of measurements: 2
The affinity was below the detection threshold of the assay.